校長學術著作

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英文學術著作

■ 專書

Knowledge-Based Software Development for Real-Time Distributed Systems, (J. J.P. Tsai and T. Weigert), World Scientific Inc., New Jersey, December 1993.
Monitoring and Debugging Distributed Real-Time Systems, (J. J.P. Tsai and S. Yang), IEEE Computer Society Press, Washington D.C., November 1994.
Distributed Real-Time Systems, (J. J.P. Tsai, Y. Bi, S. Yang, and R. Smith), Wiley & Sons Inc., New York, 1996.
Hybrid Parallel Execution Model for Logic-Based Specification Languages, (J. J.P. Tsai and B. Li), World Scientific Pub. Inc., New Jersey, 2001.
Compositional Verification of Concurrent and Real-Time Systems, (E. Juan and J. J.P. Tsai), Springer/Kluwer, 2002.
Machine Learning Applications in Software Engineering, (D. Zhang and J. J.P. Tsai), World Scientific Inc., 2005.
Security Modeling and Analysis of Mobile Agent Systems, (L. Ma and J. J.P. Tsai), Imperial College Press, London, 2006.
Ubiquitous Intelligence and Computing, (J. Ma, H. Jin, L. T. Yang, and J. J.P. Tsai), Lecture Notes in Computer Science, Springer, New York, 2006.
Advances in Machine Learning Applications in Software Engineering, (D. Zhang and J. J.P. Tsai), IGI Publishing Inc., PA, 2007.
Sensor Networks, Ubiquitous and Trustworthy Computing, (M. Singhal, G. Serugendo, J. Tsai, W. Lee, K. Romer, and Y. Tseng), IEEE Computer Society Press, 2008.
Machine Learning in Cyber Trust: Security, Privacy, Reliability, (J. J.P. Tsai and P. S. Yu), Springer, New York, 2009.
Intrusion Detection: A Machine Learning Approach, (J. J.P. Tsai and Z. Yu), Imperial College Press, London, 2010.
Humanities in the Age of Innovation: 12 Approaches(創新世代-12個人文思維), (J. J.P. Tsai), Global Views-Commonwealth Publishing Group, Taiwan, 2016.
The World Views of Nobel Laureates(諾貝爾大師的世界觀), (J. J.P. Tsai), Global Views-Commonwealth Publishing Group, Taiwan, 2017.
Computational Methods with Applications in Bioinformatics Analysis, (J. J.P. Tsai and K.L. Ng), Imperial College Press, 2017.
Application of Omics, AI and Blockchain in Bioinformatics Research., (J. J.P. Tsai and K.L. Ng), Imperial College Press, 2019.

■ 國際期刊論文

“A Model for Object Relational OLAP,” (S. Ikeda, P. Sheu, and J. J.P. Tsai), International Journal of Artificial Intelligence Tools, Vol. 19, No. 5, pp. 551-595, Oct. 2010.
“Special Issue on Selected Papers from the 9^th IEEE International Conference on Bioinformatics and Bioengineering (BIBE2009) PREFACE,” (J.J.P. Tsai, Phillip C. Y. Sheu, and Han C. W. Hsiao), International Journal on Artificial Intelligence Tools, Vol. 19 No.3 pp. 233-234, 2010.
“A Collaborative Multimedia Annotation Tool for Enhancing Knowledge Sharing in CSCL,” (Stephen J. H. Yang, Jia Zhang, Addison Y. S. Su, and Jeffrey J. P. Tsai), Interactive Learning Environments, Vol. 19 No.1 pp. 45-62, 2011.
“Cumulative Spectral Repeat Finder (CSRF): A Spectral Approach for Identifying the Length of Repeats in DNA Sequences,” (R. M. Chen, M. T. Hou, N. W. Chang, Y. T. Chen, Jeffrey J. P. Tsai), International Journal on Artificial Intelligence Tools, Vol. 20, No. 1, pp.179-194, Feb. 2011.
“Overexpression of Thy1/CD90 in human hepatocellular carcinoma is associated with HBV infection and poor prognosis.” (J. W. Lu, J. G. Chang, K. T. Yeh, R. M. Chen, Jeffrey J. P. Tsai, and R. M. Hu), Acta Histochemica, Vol. 113, No. 8, pp. 833-838, Dec. 2011.
“Induction of a Secretable Beta-Lactamase Requires a Long Lag Time in Xanthomonas Campestris pv. Campestris str. 17,” (Tsuey-Ching Yang, Mei-Jung Tsai, Jeffrey J.P. Tsai, and Rouh-Mei Hu), Research in Microbiology, Vol. 162, No. 10, pp. 999-1005, Dec. 2011.
“Increased Expression of PRL-1 Protein Correlates with Shortened Patient Survival in Human Hepatocellular Carcinoma.” (Jeng-Wei Lu, Jan-Gowth Chang, Kun-Tu Yeh, Rong-Ming Chen, Jeffrey J.P. Tsai, Wei-Wen Su, and Rouh-Mei Hu), Clin Transl Oncol, Vol. 14, pp. 287-293, 2012.
“Cefoxitin is Both an Inhibitor of Class A Beta-Lactamase of Xanthomonas Campestris pv. Campestris str. 17 and an Inducer of its Gene,” (Yang Tsuey-Ching, David Hecht, Jeffrey J.P. Tsai, and Rouh-Mei Hu ), Research in Microbiology, Vol. 163, No. 8, pp. 550-556, Sep. 2012.
“Clinical Implications of Deregulated CDK4 and Cyclin D1 Expression in Patients with Human Hepatocellular Carcinoma,” (J. W. Lu, J. G. Chang, K. T. Yeh, R. M. Chen, Jeffrey J. P. Tsai, Su, W. W. and R. M. Hu*), Med Oncol, Vol. 30,pp. 379, 2013.
“AmpG is Required for the BlaXc Beta-Lactamase Expression in Xanthomonas Campestris pv. Campestris str.17,” (Yang, Tsuey-Ching, Tzu-Fan Chen, Jeffrey J. P. Tsai, and Rouh-Mei Hu), FEMS Microbiol Lett, Vol. 340, pp. 101–108, 2013.
“Data Hiding in DNA for Authentication of Plant Variety Rights,” (Wei-Liang Tai, Charles C.N. Wang, Phillip C.Y. Sheu, and Jeffrey J. P. Tsai), Journal of Electronic Science and Techology, Vol. 11, No. 1, pp.38-43, 2013.
“Prediction of microRNA-Regulated Protein Interaction Pathways in Arabidopsis Using Machine Learning Algorithms,” (Nilubon Kurubanjerdjit, Chien-Hung Huang, Yuliang Lee, Jeffrey J.P. Tsai, and Ka-Lok Ng), Computers in Biology and Medicine, Vol. 43, pp. 1645-1652, 2013.
“The Prediction of Protein-Protein Interaction of A. Thaliana and X. Campestris Pv. Campestris Based on Protein Domain and Interolog Approaches,” (Nilubon Kurubanjerdjit, Jeffrey J.P Tsai, Chen-Yu Sheu, and Ka-Lok Ng), Plant Omics Journal 6(6):388-398, 2013.
“A Model Comparison Study of the Flowering Time Regulatory Network in Arabidopsis,” (Charles C.N. Wang, Pei-Chun Chang, Ka-Lok Ng, Phillip C.Y. Sheu, and Jeffrey J.P. Tsai), BMC Systems Biology, 8:15, 2014.
“A Computer-aided System for Discriminating Normal from Cancerous Regions in IHC Liver Cancer Tissue Images Using K-means Clustering,” (R. M. Chen, Y. J. Wu, S. R. Jhuang, M. H. Hsieh, C. L. Kuo, Y. L. Ma, R. M. Hu, and Jeffrey J. P. Tsai), WSEAS Transactions on Biology and Biomedicine, Vol. 11, 29:34, 2014.
“Disturbance of A. Thaliana microRNA-Regulated Pathways by Xcc Bacterial Effector Proteins,” (Nilubon Kurubanjerdjit, Jeffrey J.P Tsai, Chien-Hung Huang, and Ka-Lok Ng), Amino Acids, 46(4), pp. 953-961, 2014.
“The Role of A. thaliana microRNA-Regulated Protein-Protein Interaction Networks in Plant-Pathogen Interaction Study,” (Nilubon Kurubanjerdjit, Jin-Shuei Ciou, Ke-Rung Tzeng, Ching-Yi Chen, Jeffrey J. P. Tsai, Chien-Hung Huang, and Ka-Lok Ng), IAENG International Journal of Computer Science, Vol. 41, No. 2, pp. 141-147, 2014.
“Cancer Rick in Patients Aged 30 Years and above with Type 2 Diabetes Receiving Antidiabetic Monotherapy: A Cohort Study Using Metformin as the Comparator,” (Yu-Ching Chen, Victor C Kok, Ching-Hsuan Chien, Jorng-Tzong Horng, and Jeffrey J. P. Tsai), Ther Clin Risk Manag, Vol. 11, No. 13, pp.1315-1323, Aug 2015.
“FARE-CAFE: a Database of Functional and Regulatory Elements of Cancer-associated Fusion Events,” (Parveen Kumar Korla, Jack Cheng, Chien-Hung Huang, Jeffrey J. P. Tsai, Yu-Hsuan Liu, Nilubon Kurubanjerdjit, Wen-Tsong Hsieh, Huey-Yi Chen, and Ka-Lak Ng), Batabase, Vol. 2015, Aug 2015.
“Using Time-course Data to Identify Stress- and LDL-induced MicroRNA Target Genes for Vascular Smooth Muscle Cells,” (Chien-Hung Huang, Jin-Shuei Ciou, Shun-Tsung Chen, Ke-Rung Tzeng, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, and Ka-Lok Ng), Engineering Letters, Vol. 23, No. 4, pp. 307-311, Nov. 2015.
“Transcription Factor and MicroRNA-regulated Network Motifs for Cancer and Signal Transduction Networks,” (Wen-Tsong Hsieh, Ke-Rung Tzeng, Jin-Shuei Ciou, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, Chien-Hung Huang, Ka-Lok Ng), BMC Systems Biology (Suppl. 1), S5, Dec. 2015.
“Towards Semantic Biomedical Problem Solving,” (Charles C. N. Wang, Phillip C. Y. Shen, Hiroshi Yamaguchi, and Jeffrey J. P. Tsai), Semantic Computing, Vol. 9, No.4, pp. 415-431, 2015.
“KSOS-An Operating System for Knowledge Societies,” (Ke Hao, Phillip C. Y. Shen, and Jeffrey J. P. Tsai), Semantic Computing, Vol. 9, No.4, pp. 483-502, 2015.
“Finding a Potential Dipeptidyl Peptidase-4 (DPP-4) Inhibitor for Type-2 Diabetes Treatment Based on Molecular Docking, Pharmacophore Generation, and Molecular Dynamics Simulation,” (Harika Meduru, Yeng-Tseng Wang, Jeffrey J. P. Tsai, and Yu-Ching Chen), International Journal of Molecular Sciences, Vol. 17, No.6, pp. 920 , Jun. 2016.
“DNA Methylation-regulated microRNA Pathways in Ovarian Serous Cystadenocarcinoma: a Meta-analysis,” (David Agustriawan, Chien-Hung Huang, Jim Jinn-Chyuan Sheu, Shan-Chih Lee, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, and Ka-Lok Ng), Computational Biology and Chemistry, Vol. 65, pp.154-164, Dec. 2016.
“Identify Potential Drugs for Cardiovascular Diseases Caused by Stress-induced Genes in Vascular Smooth Muscle Cells,” (Chien-Hung Huang, Jin-Shuei Ciou, Shun-Tsung Chen, Victor C. Kok, Yi Chung, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, Chi-Ying F. Huang, and Ka-Lok Ng), PeerJ, Vol.4, No.e2478, 2016.
“Trust-Based Task Assignment with Multi-Objective Optimization in Service-Oriented Ad Hoc Networks,” (Y. Wang, I.R. Chen, J.H. Cho, and J.J.P. Tsai), IEEE Transactions on Network and Service Management, Vol. 14, pp. 217-232,2017.
“A Survey of Trust Computation Models for Internet of Things Systems,” (J. Guo, I.R. Chen, and J.J.P. Tsai), Computer Communications, Vol. 97, pp. 1-14,2017.
“The Combination of Computational and Biosensing Technologies for Selecting Aptamer against Prostate Specific Antigen,” (Pi-Chou Hsieh, Hui-Ting Lin, Wen-Yih Chen, Jeffrey J. P. Tsai, and Wen-Pin Hu), BioMed Research International, Vol. 2017, No. 3, pp. 1-11 2017.
“Drug Repurposing and Therapeutic Anti-MicroRNA Predictions in Oxidized Low-Density Lipoprotein-Induced the Proliferation of Vascular Smooth Muscle Cell Associated Diseases,” (Shun-Tsung Chen, Chien-Hung Huang, Victor C. Kok, Jin-Shuei Ciou, Jeffrey J. P. Tsai, Nilubon Kurubanjerdjit, Chi-Ying F Huang, and Ka-Lok Ng), Bioinformatics and Computational Biology, Vol.15, No. 1, pp.1-23, 2017.
“Trust-based Mechanism Design for Cooperative Sepctrum Sensing in Cognitive Radio Networks.” (Ji Wang, Ing-Ray Chen, Jeffrey J.P. Tsai, and Ding-Chau Wang), Computer Communications, Vol. 116, pp. 90-100, 2018.
“CATrust: Context-Aware Trust Management for Service-Oriented Ad Hoc Networks,” (Y. Wang, I.R. Chen, J.H. Cho, A. Swami, Y.C. Lu, C.T. Lu, and J.J.P. Tsai), IEEE Transactions on Services Computing, Vol. 11, Issue. 6, pp. 908-921, 2018.
“Trust-based Service Management for Mobile Cloud IoT Systems,” (Ing-Ray Chen, Jia Guo, Ding-Chau Wang, Jeffrey J.P. Tsai, Hamid Al-Hamadi and Ilsun You), IEEE Transactions on Network and Service Management, Vol.16, pp. 246-263, 2019.
“Trust-Based IoT Cloud Participatory Sensing of Air Quality,” (Jia Guo, Ing-Ray Chen, Ding-Chau Wang, Jeffrey J. P. Tsai, Hamid AI-Hamadi), Wireless Personal Communications., 105(4), pp. 1461-1474, 2019.
“Identification of Prognostic Candidate Genes in Breast Cancer by Integrated Bioinformatic Analysis.” (Wang, Charles C.N., Li, Chia Ying, Cai, Jia-Hua, Sheu, Phillip C.-Y., Tsai, Jeffrey J.P., Wu, Meng-Yu, Li, Chia-Jung and Hou, Ming-Feng), Journal of Clinical Medicine, 8(8), pp.1160, 2019.
“Usefulness of Therapeutic Hypothermia to Improve Survival in Out-of-Hospital Cardiac Arrest.” (Po-Yen Ko, Ling-Ling Wang, Yi-Jiun Chou, Jeffrey J. P. Tsai, Su-Hua Huang, Chih-Ping Chang, Yi-Tzon Shiao and Jen-Jyh Lin.), Acta Cardiologica Sinica, 35(4), pp.394-401, 2019.
“Robust and Computationally Efficient Digital IIR Filter Synthesis and Stability Analysis under Finite Precision Implementations,” (Hsien-Ju Ko and Jeffrey J.P. Tsai), IEEE Transactions on Signal Processing, vol. 68, pp. 1807-1822, 2020.
“Identification of Hub Genes Associated with Development of Head and Neck Squamous Cell Carcinoma by Integrated Bioinformatics Analysis,” (Chia Ying Li, Jia-Hua Cai, Jeffrey J.P. Tsai, and Charles C.N. Wang), Frontiers in Oncology, vol. 10, Issue. 681, 2020.
“A Patient-Centric Health Information Exchange Framework Using Blockchain Technology” (Yan Zhuang, Lincoln R. Sheets, Yin-Wu Chen, Zon-Yin Shae, Jeffrey J.P. Tsai, and Chi-Ren Shyu), IEEE Journal of Biomedical and Health Informatics, 2020.
“Text Mining in literature review of urothelial cancer using topic model,” (Hsuan-Jen Lin, Phillip C.-Y. Sheu, Jeffrey J. P. Tsai, Che-Yi Chou, and Charles C.N. Wang), BMC Cancer, 2020.
“Dissecting molecular network structures using a network subgraph approach,” (Chien-Hung Huang, Efendi Zaenudin, Jeffrey J.P. Tsai, Nilubon Kurubanjerdjit, Eskezeia Y. Dessie, Ka-Lok Ng), PeerJ, 2020.
“Identification of most influential co-occurring gene suits for gastrointestinal cancer using biomedical literature mining and graph-based influence maximization,” (Charles C.N Wang, Jennifer Kin, Jan-Gowth Chang, Masahiro Hayakawa, Atsushi Kitazawa,Jeffrey J. P. Tsai and Phillip C.-Y. Sheu), BMC Medical Informatics and Decision Making, 2020.

■ 研討會論文

“Object Relational Programming of Biomedical Images” (Han C.W. Hsiao, R. M. Hu, W. L. Tai, R. M. Chen, Jeffrey J.P. Tsai), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“Ergonomic Designs Based on Musculoskeletal Models” (Chun-Ming Chang, Jeffrey Tsai), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“Simulation of Bacterial Chemotaxis by the Random Run and Tumble Model” (Charles C.N. Wang, Ka-Lok Ng, Yu-Ching Chen, Phillip C.Y. Sheu, Jeffrey J.P. Tsai), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“Molecular Modeling Studies of AmpR Mediated AmpC beta-Lactamase Repression” (David Hecht, Charles C.N. Wang, Rouh-Mei Hu, Jeffrey J.P. Tsai), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“Investigating Cancer-related Proteins Specific Domain Interactions and Differential Protein Interactions Caused by Alternative Splicing” (Yu-Liang Lee, Jie-Wei Weng, Wen-Chin Chiang, Yi-Wen Lin, Ka-Lok Ng, Jeffrey Jing-Pha Tsai, Chi-Ying Huang), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“The Application of Molecular Markers to Identify Edible Fungi - A Case Sudy of Tremella fuciformis” (Jing-Gung Chung, Jeffrey J.P. Tsai, Chien-Yih Lin, Yang-Chia Shih, Jin-Shih Chen, Ming-Jen Fan), Proceedings of the 11^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“TTRSIS: A Cloud Computing Platform for Rice Functional Genomics Research through a Reverse Genetics Approach” (Ming-Jen Fan, Su-May Yu, Tzu-Chieh Hung, Wei-Quan Chen, Yue-Ie Hsing, Hsin-Li Lin, Chia-Cheng Liu, Jing-Gung Chung, Jeffrey J.P. Tsai), Proceedings of the 11th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 24-26, 2011.
“Towards Improving the Biological Relevance of Time-Series Gene Expression Clustering Using support Vector machine” (Pei-Lin Chen, Rong-Ming Chen, Chien-Yuan Li, Rouh-Mei Hu, Been-Chian Chien, and Jeffrey Tsai), Proceedings of the 23^rd International Conference on Genome Informatics, Dec. 12-14, 2012. (poster paper)
“Molecular Simulation Methods for Selecting Thrombin-Binding Aptamers” (Kumar Jangam Vikram, Wen-Yih Chen, Jeffrey J. P. Tsai, and Wen-Pin Hu), Proceedings of the 10^th FTRA International Conference on Secure and Trust Computing data management, and Applications, July 8-10, 2013.
“A Study of Floral Transition in Arabidopsis Using Partial Correlation Analysis” (Nikubon Kuruanjerdjit, Jeffrey J.P. Tsai, Jin-Shuei Ciou, Ka-Lok Ng ), Proceedings of the 2013 International Conference on Bioinformatics & Computational Biology , July 22-25, 2013.
“Compounds Screening from Traditional Chinese Herbs for Inhibition of In-stent Restenosis in Coronary Atherosclerosis” (Jia-Zhen Guo, Yo-Xiu Lin, Pei-Chun Chang, Chieh-Hsi Wu, Phillip C.Y. Sheu, Jeffrey J. P. Tsai), Proceedings of the 12^th Asia Pacific Bioinformatics Conference, Jan 15-19, 2014.
“An Integrated Systems Biology Approach for Biological Systems” (Jeffrey J.P. Tsai), Proceedings of the 12^th IEEE International Symposium on Autonomous Decentralized Systems, March 25-27, 2015.
“The 95% Ethanolic Extract from Typha Angustifolia has an Anti-Smooth Muscle cell Proliferation and Anti-Inflammation Effect” (Chun-Tzu Chen, Jeffrey J.P. Tsai, Tzu-Fan Chen, Hebron C. Chang, and Rouh-Mei Hu), Proceedings of the 19^thInternational Congress of Cytology, May 28-Jun. 01, 2016.
“National Representatively Healthcare Database and the Application” (Yi Chung, Yu-Ching Chen, and Jeffrey J. P. Tsai), Proceedings of the Second IEEE International Conference on Multimedia Big Data, Apr. 20-22, 2016.
“Trust-based Cooperative Spectrum Sensing Against SSDF Attacks in Distributed Cognitive Radio Networks” (Ji Wang, Ing-Ray Chen, Jeffrey J.P. Tsai, and Ding-Chau Wang), Proceedings of the 2016 IEEE Communications Society Communications Quality and Reliability Workshop, May 10, 2016.
“A Deep Learning-Based Customer Forecasting Tool” (Kuo-Yi, Lin and Jeffrey J.P. Tsai), Proceedings of the Second IEEE International Conference on Multimedia Big Data, Apr. 20-22, 2016.
“A Hierarchical Cloud Architecture for Integrated Mobility, Service, and Trust Management of SOA-based Internet of Things” (Jian Guo, Ing-Ray Chen, Jeffrey J.P. Tsai, and Hamid Al-Hamadi), Proceedings of the 6^th IEEE International Conference on Innovative Computing Technology, Dublin, Ireland, Aug. 24-25, 2016.
“Mining Distinctive DNA Patterns from the Upstream of Human Coding&Non-Coding Genes via Class Frequency Distribution” (Jing-Doo Wang, Wen-Ling Chen, Charles C N Wang, Jan-Gowth Chamg, and Jeffrey J.P. Tsai), Proceedings of the IEEE International Conference on Computational Intelligence in Bioinformatics and Computational Biology, Oct. 5-7, 2016.
“Drug repurposing and therapeutic anti-microRNA predictions in oxidized low-density lipoprotein-induced the proliferation of vascular smooth muscle cell associated disease” (Ka-Lok Ng and Jeffrey J.P. Tsai), Proceedings of the 27^th International Conference on Genome Informatics, Oct. 3-5, 2016.
“DNA Methylation-regulated microRNA Pathways in Ovarian Serous Cystadenocarcinoma: a Meta-analysis” (David Agustriawan, Ka-Lok Ng, and Jeffrey J.P. Tsai), Proceedings of the 27^th International Conference on Genome Informatics, Oct. 3-5, 2016.
“A Comparison Study of Reverse Engineering Gene Regulatory Network Modeling” (Charles C.N. Wang, Pei-Chun Chang, Phillip C.Y. Sheu, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“Application of Latent Semantic analysis to clustering of Cardiovascular Gene Ontology” (Charles C.N. Wang, Yu-Liang Lee, Phillip C.Y. Sheu, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“Stent Design for Compensating Wall Shear Stress via Computational Modeling and Fluid Dynamics” (Chun-Ming Chang, Wei Shin Wong, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“Genome-wide Functional Identification of Maximal Consensus Patterns Derived from Multiple Species piRNAs” (Wen-Ling Chan, Jing-Doo Wang, Jan-Gowth Chang, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“piRNAtarget: the Integrated Database for Mining Functionality of piRNA and its Targets” (Bing-Rong Jiang, Wan-Ye Wu, Wen-Ling Chan, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“Fine Classification of Human Gut Microbiota by Using Hierarchical Clustering Approach” (Tzu-Fan Chen, Rong-Ming Chen, Jeffrey J. P. Tsai, and Rouh-Mei Hu), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“Deep Learning for Risk Analysis of Specific Cardiovascular Diseases Using Environmental Data and Outpatient Records” (Han C.W. Hsiao, Sean H.F. Chen, and Jeffrey J.P. Tsai), Proceedings of the 16^th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 31-Nov. 02, 2016.
“A Hierarchical Cloud Architecture for Integrated Mobility, Service, and Trust Management of Service-Oriented Internet of Things,” (J. Guo, I.R. Chen, J.J.P. Tsai, and H. Al-Hamadi), Proceedings of the 6^th IEEE international conference on Innovative Computing Technology, Dublin, Ireland, August 2016.
“Trust-based Cooperative Spectrum Sensing against SSDF attacks in Distributed Cognitive Radio Networks,” (J. Wang, I.R. Chen, J.J.P. Tsai, and D.C. Wang), Proceedings of the IEEE Communications Quality and Reliability International Workshop, Stevenson, Washington, May 2016. (Best Paper Award.)
“Trust-based IoT Participatory Sensing for Hazard Detection and Response,” (Jia Guo, Ing-Ray Chen, Jeffrey J.P. Tsai, and Hamid Al-Hamadi), Proceedings of the 1^st International Workshop for IoT Systems Provisioning and Management in Cloud Computing , Oct.10-13, 2016.
“A Mobile Cloud Hierarchical Trust Management Protocol for IoT Systems,” (J. Guo, I.R. Chen, and J.J.P. Tsai), Proceedings of the 5^th IEEE International Conference on Mobile Cloud Computing, Services, and Engineering, San Francisco, Apr. 2017.
“A Comparative Analysis of Trust-based Service Composition Algorithms in Service-Oriented Ad Hoc Networks,” (Y. Wang, I.R. Chen, J.H. Cho, and J.J.P. Tsai), Proceedings of the International Conference on Information System &s; Data Mining, U.S., Apr. 2017.
“A Case Study of IoT Participatory Sensing of Hazardous Ozone using Traces.” (Jia Guo, Ing-Ray Chen, Ding-Chao Wang, Jeffrey J. P. Tsai and Hamid AI-Hamadi), Proceedings of the 7^th International Conference on Electronics, Communications and Networks, Taiwan, June 2017.
“On the Design of a Blockchain Platform for Clinical Trial and Precision Medicine.” (Zonyin Shae and Jeffrey J.P. Tsai), Proceedings of the 37^th IEEE International Conference on Distributed Computing Systems, USA, June. 2017.
“Extracting the Co-occurrences of DNA Maximal Repeats in both Human and Viruses.” (Jing-Doo Wang, Yi-Chun Wang, Rouh-Mei Hu and Jeffrey J. P. Tsai), Proceedings of the 17^th IEEE International Conference on BioInformatics and BioEngineering, U.S., Oct. 2017.
“Potential Applications using the Class Frequency Distribution of Maximal Repeats from Tagged Sequential Data.” (Jing-Doo Wang, Jeffrey J.P. Tsai, and Charles C.N. Wang), Proceedings of the 3^rd International Conference on Fuzzy Systems and Data Mining, Taiwan , Nov. 2017.
“A Hybrid Blockchain Design for Patient Recruitments and Persistent Monitoring for Clinical Trials” (Yan Zhuang, Andrea Atkins, Chi-Ren Shyu, Zonyin Shae, Jeffrey J.P. Tsai, Chung Hsu), Proceedings of the IEEE Standards Association: Blockchain for clinical trials, Orlando Florida, Fed. 2018.
“Application of Semantic Computing in Cancer on Secondary Data Analysis.” (Charles C. N. Wang, I-Seng Chang, Phillip C.-Y. Sheu, and Jeffrey J. P. Tsai), Proceedings of the 5^th IEEE International Conference on Algorithms for Computational Biology , HK, June. 2018.
“Utilize Imputation Method and Meta-analysis to Identify DNA-Methylation-Mediated microRNAs in Ovarian Cancer.” (Ezra B. Wijaya, Erwandy Lim, David Agustriawan, Chien-Hung Huang and Jeffrey J. P. Tsai, and Ka-Lok Ng), Proceedings of the Second IEEE International Conference on Robotic Computing, USA, Jan. 2018.
“Transform Blockchain into Distributed Parallel Computing Architecture for Precision Medicine.” (Zonyin Shae and Jeffrey J. P. Tsai), Proceedings of the 38^th IEEE International Conference on Distributed Computing Systems, Vienna, July, 2018.
“Trust as a Service for IoT Service Management in Smart Cities” (Ing-Ray Chen, Jia Guo, Ding-Chao Wang, Jeffrey J. P. Tsai, Hamid Al-Hamadi, Ilsun You), Proceedings of the Second IEEE International Conference on Smart City, UK, June 2018.
“Stratification of Human Gut Microbiome and Building a SVM-Based Classifier” (His-Chung Kung, Jeffrey J. P. Tsai, Rong-Ming Chen, and Rouh-Mei Hu), Proceedings of the 18^th IEEE International Conference on BioInformatics and BioEngineering, Taiwan, Oct. 2018.
“Identification of Several Core Overexpressed MicroRNAs that Could Predict Survival in Patients with Ovarian Cancer” (Eskezeia Y. Dessie, Ezra B. Wijaya, Chien-Hung Huang, David Agustriawan, Jeffrey J. P. Tsai, and Ka-Lock Ng), Proceedings of the 18^{th IEEE International Conference on BioInformatics and BioEngineering}, Taiwan, Oct. 2018.
“Quantitative Analysis of ECI2 Expression from RNA-seq for Breast Cancer Gene Signatures” (Ming-Yi Yen, Hsueh-Ting Chu, Yu-Ching Chen, and Jeffrey J P Tsai), Proceedings of the 18^th IEEE International Conference on BioInformatics and BioEngineering, Taiwan, Oct. 2018.
“Identification of Potential Long Non-coding RNA Biomarkers for Breast Cancer Patients with Somatic BRCA1 Mutations from RNA-Seq Datasets” (Jia-Hua Cai, Yu-Ching Chen, Hsueh-Ting Chu, and Jeffrey J. P. Tsai), Proceedings of the 18^th IEEE International Conference on BioInformatics and BioEngineering, Taiwan, Oct. 2018.
“The Potential Dual-target Inhibitors for HER2/HSP90 Proteins from Traditional Chinese Medicine” (Jhih-Ying Chen, Chia-Min Chen, Pei-Chun Chang, and Jeffrey J.P. Tsai), Proceedings of the 18^th IEEE International Conference on BioInformatics and BioEngineering, Taiwan, Oct. 2018.
“Computational Modeling of the Early Development of Embryonic Leaves in Maize” (Charles C.N. Wang, Pei-Chun Chang, Phillip C.Y. Sheu, and Jeffrey J.P. Tsai), Proceedings of the 18^th IEEE International Conference on BioInformatics and BioEngineering, Taiwan, Oct. 2018.
“Applying Blockchain Technology for Health Information Exchange and Persistent Monitoring for Clinical Trials” (Yan Zhuang, Lincoln Sheets, Zonyin Shae, Jeffrey J. P. Tsai, Chi-Ren Shyu), Proceedings of the AMIA 2018 Annual Symposium, San francisco, Nov. 2018.
“AI Blockchain Platform for Trusting News” (Zonyin Shae and, Jeffrey J. P. Tsai), Proceedings of the 2019 IEEE International Conference on Distributed Computing Systems, Dallas Texas, Jul. 2019.
“Machine Learning Classification Algorithms on Treadmill Exercise Data for Predicting Significant Coronary Artery Disease” (James K. S. Wong, You-Zh Lin, Jeffrey J.P. Tsai and Charles C.N. Wang), The First International Symposium on Future ICT (Future ICT 2019), Taiwan, Oct. 2019.
“Random Sampling Deep Learning Mechanism for Discovering Unique Property of No Specific Local Feature Images” (Zon-Yin Shae, Zhi-Ren Tsai,Chi-Yu Chang and Jeffrey J.P. Tsai), Proceedings of the First IEEE International Conference on Cognitive Machine Intelligence, Taiwan, Dec. 2019.
“Development of A Blockchain Framework for Virtual Clinical Trials” (Yan Zhuang, Lincoln Sheets, Zonyin Shae, Jeffrey J. P. Tsai, Chi-Ren Shyu), Proceedings of the AMIA 2020 Annual Symposium, San francisco , Nov. 2020.

■ 專書章節

“A Systematic Gene Expression Explorer Tool for Multiple and Paired Chips,” (J. W. Ou, R. M. Chen, R. M. Hu, C. Y. Hsu, and Jeffrey J. P. Tsai), Biomedical Engineering: Health Care Systems, Technology and Techniques, Springer, New York, 2011.
“IHCREAD: An Automatic Immunohistochemistry Image Analysis Tool,” (C. Y. Hsu, R. M. Hu, R. M. Chen, J. W. Ou, and Jeffrey J. P. Tsai), Biomedical Engineering: Health Care Systems, Technology and Techniques, Springer, New York, 2011.
“Sharing Cancer-related Genes Research Resources on Peer-to-Peer Network,” (C. C. Wu, R. M. Chen, and Jeffrey J. P. Tsai), Biomedical Engineering: Health Care Systems, Technology and Techniques, Springer, New York, 2011.
“Semanic Analytics of Biomedical Data,” (Charles C. N. Wang, Phillip C.-Y. Sheu, and Jeffrey J. P. Tsai), Computational Methods with Applications in Bioinformatics Analysis, World Scientific Inc., New York, 2017.
“Use of semantics in Bio-Informatics,” (Charles C. N. Wang, and Jeffrey J. P. Tsai), Semantic Computing, World Scientific Inc., New York, 2018.
“Use of semantics in Medical Informatics,” (Charles C. N. Wang, and Jeffrey J. P. Tsai), Encyclopedia with Semantic Computing and Robotic Intelligence, World Scientific Inc., New York, 2018.
“A Semantic Computing for Cancer Recommendation in Human Robot Interaction,” (Charles C. N. Wang, I-Seng Cheng, Phillip C.-Y. Sheu, and Jeffrey J. P. Tsai), Encyclopedia with Semantic Computing and Robotic Intelligence, World Scientific Inc., New York, 2018.

學術活動

■ Journal Editorship Positions

Advisory Board, International Journal of Big Data Intelligence, 2014.
Honorary Editors-in-Chief , International Journal of Engineering and Industries (IJEI), 2010-2015.
Co-Editor-in-Chief, International Journal of Artificial Intelligence Tools, 1994-present.
Editor-in-Chief, SDPS Transaction on Integrated Design and Process Science, 2001 - 2006.
Editor-in-Chief, Book Series in Health Informatics, 2005-2010.
Editor, Annals of Software Engineering (Kluwer), 2000-2002.
Associate Editor, IEEE Transactions on Knowledge and Data Engineering, 1994 - 1999.
Associate Editor, IEEE Transactions on Services Computing, 2008 - 2012.
Associate Editor, International Journal of Systems Integration (Kluwer), 1994-2002.
Associate Editor, International Journal of Web Services Research, 2003-present.
Associate Editor, International Journal of Software Engineering and Knowledge Engineering, 1990 - 2010.
Associate Editor, International Journal of Semantic Computing, 2007 - present.
Associate Editor, Journal of Ubiquitous Computing and Intelligence, 2005 – present.
Editor, Int’l Journal of Cognitive Informatics and Natural Intelligence, 2005 – present.
Editor, Encyclopedia of Computer Science and Engineering, Wiley Interscience, 2002-2009.
Associate Editor, International Journal of Software Science and Computational Intelligence (IJSSCI), 2009 - present.
Editor, Handbook on Software Engineering and Knowledge Engineering, 1999-2002.
Editor, Journal of the Chinese Institute of Engineers, 1997 - 2004.
Guest Co-Editor, ACM Transactions on Autonomous and Adaptive Systems, 2006.
Guest Co-Editor, International Journal of Software Engineering and Knowledge Engineering, special issue on Software and Knowledge Support in Bioinformatics, April 2005.
Guest Editor, Annals of Software Engineering, special issue on Multimedia Software Engineering, 2001.
Guest Co-Editor, International Journal of Software Engineering and Knowledge Engineering, special issue on Multimedia Software Engineering, 1999.
Guest Editor, Annals of Software Engineering, special issue on Real-Time Software Engineering, 1999.
Guest Editor, International Journal of Software Engineering and Knowledge Engineering, special issue on High-Assurance Systems, 1999.
Guest Editor, IEEE Transactions on Knowledge Engineering and Data Engineering, special issue on Dependability of A.I. Systems, Feb. 1995.
Guest Editor, International Journal on Software Engineering and Knowledge Engineering, special issue on A.I. Techniques for Software Engineering, Dec. 1992.

■ Honorary Conference/General Chair

IEEE Knowledge and Data Engineering Exchange Symposium, Taipei, 1998.
The ATLAS (Transdisciplinary-Transnational-Transcultural Biennial Meeting), Taichung, 2012.

■ Conference/General Chair (or Co-Chair)

The 18^th annual IEEE International Conference on BioInformatics and BioEngineering, Taichung, Taiwan, Otc. 29-31, 2018.
The 19^th IEEE International Symposium on Multimedia, Taichung, Taiwan, Dec. 11-13, 2017.
The Challenges and Opportunities for Higher Education in the Age of the Fourth Industrial Revolution, Taichung, Taiwan, Nov. 20-21, 2017.
The 1^st IEEE International Conference on Robotic Computing, Taichung, Taiwan, Apr. 10-12, 2017.
The 9^th IEEE International Conference on Cloud Computing, USA, Jun. 27 – Jul. 2, 2016.
The 16^th IEEE International Conference on Bioinformatics and Bioengineering, Taiwan, Oct. 31 – Nov. 2, 2016.
The 2^nd IEEE International Conference on Multimedia Big Data, Taiwan, Apr. 20 – 22, 2016.
The 21^st IEEE International Conference on Web Services, Jun. 27 – Jul. 2, 2014, Alaska, USA
The National Computing Symposium, Taiwan, Dec 13-14, 2013
The 11^th IEEE International Conference on Bioinformatics and Bioengineering, Taichung, Taiwan, Oct. 24-26, 2011.
The 11^th IEEE Int’l Symposium on Multimedia, San Diego, California, Dec. 14-16, 2009.
The 9^th IEEE Conference on Bioinformatics and Bioengineering, Taiwan, June 22-24, 2009.
The Third IEEE Asia-Pacific Services Computing Conference (APSCC 2008), Yilan, Taiwan, December 09-12, 2008.
The 1^st IEEE Int’l Workshop on Multimedia, Information Privacy, Intelligent Computing Systems, Yilan, Taiwan, December 09-12, 2008.
The 2008 IEEE International Conference on Sensor Networks, Ubiquitous and Trustworthy Computing, Taiwan, June 11-13, 2008.
The 11^th Conference on Integrated Design and Process Technology, Taiwan, June 1-6, 2008.
The 1^st IEEE International Workshop on Ambient Semantic Computing, Taiwan, June 11-13, 2008.
The 9^th IEEE Int’l Symposium on Multimedia, Taiwan, Dec. 10-12, 2007.
The 1^st International Symposium on Creativity, Innovation, and Entrepreneurship (INSPIRE07), Taiwan, May 30 – June 1, 2007.
The 3^rd IFIP International Conference on Ubiquitous Intelligence and Computing, Wuhan, China, September, 2006.
The 1^st IEEE International Conference on Sensor Networks, Ubiquitous and Trustworthy Computing, Taiwan, June 5-7, 2006.
The 7^th IEEE Int’l Symposium on Multimedia, Irvine, CA, Dec. 12-14, 2005.
The 16^th IEEE Int’l Symposium on Software Reliability Engineering, Chicago, ILL., Nov. 8-11, 2005.
The 4^th IEEE Int’l Conference on Cognitive Informatics, Irvine, CA, August 2005.
The 5^th IEEE Int’l Symposium on Bioinformatics and Bioengineering, Taiwan, May 2004.
The 6^th Conference on Engineering Technology and Application of Chinese and Western Medicine, Taiwan, May 2003.
The 4^th IEEE Multimedia Software Engineering Symposium, Irvine, CA, Dec. 2002.
2002 Object-Oriented Technology and Application Workshop, Taiwan Oct. 2002.
National Information Security Conference, Taiwan, May 2002.
The 2^nd IEEE Multimedia Software Engineering Workshop, Kyoto, Japan, 1998.
IEEE Knowledge and Data Engineering Exchange Workshop, Irvine, CA, 1997.
The IEEE International Conference on Tools with Artificial Intelligence, New Orleans, November 1994.
MACSTA Fall Forum, Mid-America Chinese Science and Technology Association, Lisle, ILL., Nov. 1993.

■ Program Chair (or Co-Chair)

The 5^th IEEE International Symposium on Autonomous Decentralized Systems, Richardson, Texas, 2001.
The 3^rd IEEE High-Assurance Systems Engineering Symposium, Washington D.C., 1998.
The 5^th IEEE International Conference on Tools with Artificial Intelligence, Boston, 1993.
The 13^th IEEE International Computer Software and Applications Conference, Orlando, Florida, 1989.

■ Member of Steering Committee or Advisory Committee

Member, Advisory Board, Vellore Institute of Technology (VIT), India, 2017.
Member, Steering Committee, The 11^th IEEE International Conference on Bioinformatics and Bioengineering, Taichung, Taiwan, Oct. 24-26, 2011.
Chair, Steering Committee, The 2010 IEEE International Conference on Sensor Networks, Ubiquitous and Trustworthy Computing, Newport Beach, CA, June 7-9, 2010.
Member, Steering Committee, The IEEE International Conference on Multimedia and Expo (ICME), Singapore, July 21-23, 2010.
Member, International Advisory Committee, The 5th International Conference on Future Information Technology (FutureTech2010), Jeju, Korea, May 21-23, 2010.
Member, Steering Committee, The IEEE Technical Committee on Service Computing, IEEE Computer Society, 2009.
Member, Advisory Committee, 2009 Object-Oriented Technology and Application Workshop, Taiwan, Nov. 2009.
Member, Technical Steering Committee, The IEEE International Conference on Web Services, Los Angels, July 6-10, 2009.
Chair, Steering Committee, The 10^th IEEE International Symposium on Multimedia, Berkeley, CA, December 15-17, 2008.
Member, International Advisory Committee, Int’l Computer Symposium, Taipei, Taiwan, Nov. 13-15, 2008.
Member, Steering Committee, The 8^{th IEEE Int’l Conference on Bioinformatics and Bioengineering, Athens, Greece, Oct. 8-10, 2008.}
Member, Technical Advisory Committee, The 2008 International Conference on Web Services, Beijing, China, September 23-26, 2008.
Member, Steering Committee, The 2^nd IEEE International Conference on Semantic Computing, Santa Cruz, CA, August 4-7, 2008.
Member, Technical Steering Committee, The 2008 IEEE International Conference on Services Computing, Hawaii, July 8-11, 2008.
Member, Steering Committee, The 5^th IFIP International Conference on Ubiquitous Intelligence and Computing (UIC08), Oslo, Norway, June 23-25, 2008.
Member, International Advisory Committee, The 22^nd IEEE International Conference on Advanced Information Networking and Applications (AINA2008), Okinawa, Japan, March 25 – 28, 2008.
Member, International Advisory Committee, the 3^rd International Symposium on Ubiquitous Application and Security Service (UASS08), Okinawa, Japan, March 25-28, 2008.
Chair, Steering Committee, The 1^st IEEE International Conference on Semantic Computing, Irvine, CA, September 17-19, 2007.
Member, Advisory Committee, The IEEE International Workshop on Web 2.0 and Multimedia-Enabled Education, Taiwan, Dec. 2007.
Member, Steering Committee, The 2^nd International Workshop on Ubiquitous Applications and Security Service (UASS07), Kuala Lumpur, Malaysia, August 26-30, 2007.
Member, Steering Committee, The 4^th IFIP International Conference on Ubiquitous Intelligence and Computing, Hong Kong, July 11-13, 2007.
Member, Steering Committee, The 4^th IFIP International Conference on Autonomic and Trusted Computing, Hong Kong, July 11-13, 2007.
Member, International Advisory Committee, The 21^st IEEE International Conference on Advanced Information Networking and Applications (AINA2007), Niagara Falls, Canada, May 21-23, 2007.
Member, Technical Advisory Committee, the 2006 International Conference on Services Computing, Chicago, Illinois, September 18-22, 2006.
Member, Technical Advisory Committee, the 2006 International Conference on Web Services, Chicago, Illinois, September 18-22, 2006.
Member, International Advisory Committee, The 20^th IEEE International Conference on Advanced Information Networking and Applications (AINA2006), Vienna, April 18- 20, 2006.
Member, Steering Committee, IEEE Int’l Symposium on Multimedia, San Diego CA, Dec. 12-14, 2006.
Member, International Advisory Committee, The 2^nd International Symposium on Ubiquitous Intelligence and Smart Worlds (UISW2005), Nagasaki, Japan, Dec. 6-7, 2005.
Member, Technical Advisory Committee, the 2005 International Conference on Web Services, Orlando, Florida, July 11-15, 2005.
Member, International Advisory Committee, IEEE International Conference on Multimedia and Expo., Taipei, 2004.
Member, Advisory Board, International Journal of Fuzzy Systems, 2003-present.
Member, Technical Advisory Committee, the 2003 International Conference on Web Services, Las Vegas, Nevada, June 23-26, 2003.
Member, Advisory Board, Tamkang Journal of Science and Engineering, 2002 - present.
Member, Steering Committee for IEEE Transactions on Multimedia, 2000-2003.
Member, Track Advisory Committee, 1994 ACM Symposium on Applied Computing (SAC '94), 1994.
Member, Steering Committee, IEEE International Knowledge and Data Engineering Workshop, 1997- 1998.
Member, Steering Committee, IEEE International Conference on Tools with A.I., 1994-present.

■ Other Committee Activities

Session Organizer, the 11^th IEEE Symposium on Object/Component/Service-oriented Real-time Distributed Computing (ISORC08), May 5-7, 2008.
Judge, the Illinois Junior Academy of Science, March 14, 2007.
Track Chair, IEEE International Conference on Multimedia and Expo., Baltimore, Maryland, July 6-9, 2003.
Co-Organizer, 3^rd Intelligent Software Engineering Workshop, in conjunction with IEEE International Conference on Software Engineering, Ireland, 2000.
Track Chair, The 4^th World Congress on Integrated Design and Process Technology, Turkey, 1999.
Session Organizer, Panel session on "E-Commerce," IEEE Knowledge and Data Engineering Exchange Workshop, 1998.
Track Chair, The 2^nd World Congress on Integrated Design and Process Technology, Austin, TX, 1997.
Program Vice-Chair, 19^th IEEE International Computer Software and Applications Conference, Dallas, August, 1995.
Tutorial Chairman, IEEE International Conference on Requirements Engineering, Colorado, April 1994.
Tutorial Chairman, International Conference on Parallel and Distributed Systems, December 1993.
Judge of IEEE Richard E. Merwin Scholarships, 1993.
Tutorial Co-Chairman, IEEE International Computer Symposium, Dec. 1992.
Workshop Organizer, 1992 Real-Time Systems Workshop, Taipei, 1992.
Session Organizer, Panel session on "Is Artificial Intelligence the Solution to Software Engineering" 1991 International Conference on Tools for A.I., San Jose, CA, 1991.
Session Organizer, Paper session on "Artificial Intelligence and Software Engineering" 1990 International Conference on Tools for A.I., Fairfax, VA, 1990.
Workshop Organizer, 1990 Software Engineering Workshop, Academia Sinica, Taipei, 1990.
Session Organizer, Panel session on "Critical Issues of Real-Time Software Systems" COMPSAC'89, Orlando, Florida.
Finance Chairman, IEEE International Computer Software and Applications Conference, 1986-1988.
Member, Conference Committee, IEEE International Computer Software and Applications Conference, 1983, 1985.

■ Member of Technical Program Committee

The 4^th IEEE Asia-Pacific Services Computing Conference (APSCC 2009), Singapore, December 07-11, 2009.
The 1^st IEEE Int’l Conference on Cloud Computing, Bangalore, India, Sept. 21-25, 2009.
The 21^st International Conference on Software Engineering and Knowledge Engineering, Boston, July 1-3, 2009.
The 8^th IEEE Int’l Conference on Cognitive Informatics, Hong Kong , June 15-17, 2009.
The 9^th IEEE International Conference on Autonomous Decentralized Systems, Greece, March 23-25, 2009.
The 7^th IEEE Int’l Conference on Cognitive Informatics, Stanford University, CA , August 14-16, 2008.
The First IEEE International Workshop on Cyber-Physical Systems, Sponsored by National Science Foundation of the United States, in conjunction with IEEE ICDCS 2008, Beijing, China, June 17-20, 2008.
IFIP International Conference on Embedded and Ubiquitous Computing, Taipei, Dec. 2007.
The 6^th IEEE Int’l Conference on Cognitive Informatics, Lake Tahoe, CA , August 6-8, 2007.
International Conference on Parallel Processing, Columbus, Ohio, August 14-18, 2006.
The 2^nd International Conference on Innovations and Real-time Applications of Distributed Senor Networks, Washington D.C. October 18-19, 2006.
IEEE International Conference on Web Services, Chicago, Sept. 18-22, 2006.
The 5^th IEEE Int’l Conference on Cognitive Informatics, Beijing, July 17-19, 2006.
The 17^th IEEE Int’l Symposium on Software Reliability Engineering, North Carolina, Nov. 6-10, 2006.
International Conference on Software Engineering and Knowledge Engineering, 1993, 1994, 1995, 2000, 2004, 2005, 2006.
The 5^th Int’l Conference on Quality Software, Melbourne, Australia, Sept. 19-21, 2005.
2005 IEEE International Conference on Multimedia and Expo., Amsterdam, 2005.
2005 IEEE International Collaborative Computing, Cape Code, June 2005.
2005 IEEE International Service Computing, Orlando, July 12-15, 2005.
IEEE Symposium on High-Assurance Systems Engineering, 2004.
IEEE International Conference on Electronic Commerce (CEC’03), Newport Beach, California, June 2003.
2003 International Conference on Web Services, Las Vegas, Nevada, June 23 - 26, 2003.
SEKE2003 15th International Conference on Software Engineering and Knowledge Engineering, San Francisco Bay, July 1-3, 2003.
The 15^th IEEE International Conference on Tools with Artificial Intelligence, Sacramento, California, November 3-5, 2003.
The 11^th World-Wide-Web Conference, Hawaii, 2002.
The 4^th IEEE International Workshop on Advanced Issues of E-Commerce and Web-Based Information Systems(WECWIS 2002), Newport Beach, California, June 2002.
The 14^th International Conference on Software Engineering and Knowledge Engineering (SEKE’02), Ischia, Italy, July 15-18, 2002.
IEEE International Computer Software and Applications Conference, 1995, 1996, 1997, 2000, 2001.
The Second Workshop on Agent-Oriented Software Engineering in conjunction with 5th International Conference on Autonomous Agents (Agents 2001), Montreal, Canada, May/June 2001.
First International Workshop on Internet Bots: Systems and Applications.
(INBOSA2001)" in conjunction with the 12th International Conference on Database and Expert Systems Applications, Munich, Germany, September 3-7, 2001.
IDPT 5^th World Congress on Integrated Design and Process Technology, Dallas, 2000.
The 3^rd IEEE Symposium Application-specific Systems and Software Engineering and Technology (ASSET'00), Richardson, Texas, March 24-25, 2000.
The 3^rd IEEE Knowledge and Data Engineering Exchange Workshop, Evanston, IL, 2000.
International Workshop on Agent-Based Information Systems (ABIS'2000)
Greenwich, United Kingdom, September 4-8, 2000.
The First International Workshop on Agent-Oriented Software Engineering(AOSE-2000), Limerick, Ireland, June 10, 2000.
IEEE International Conference on Data Engineering, 1999.
IEEE International Conference on Autonomous Decentralized Systems, 1999.
IEEE Symposium on Object-Oriented Real-Time Computing, 1998.
IEEE Workshop on Object-Oriented Dependable Real-Time Systems, 1997.
IEEE High-Assurance Systems Engineering Workshop, 1996, 1997.
IEEE 2^nd Requirement Engineering Symposium, 1996.
International Conference on Artificial Intelligence, 1996.
IEEE International Conference on Data Engineering, 1995.
The 4^th ACM Information and Knowledge Management Conference, 1995.
IEEE International Parallel and Distributed Processing Conference, 1994.

■ Invited Keynote Speech

Distinguished Speaker, "Knowledge-Based Software Engineering for Communication Software," Advanced Communication Research Laboratory, Kyoto, Japan, Oct., 1994.
Tamkang Chair Distinguished Speaker, "Engineering of Intelligent Systems," Tamkang University, Taiwan, May 1999.
Keynote Speaker, "Engineering of Intelligent Agent Systems," The 11^th IEEE International Conference on Tools with Artificial Intelligence, Chicago, ILL., Nov. 1999.
Distinguished Speaker, "Specification and Verification of Agent-Based Systems," University of Texas at Dallas, Nov. 1999.
Distinguished Speaker, "Knowledge-Based Software Systems," University of Wollongong, Australia, August 2000.
Keynote Speaker, "Engineering of Agent-Based Systems," International Computer Symposium, Taiwan, Dec. 2000.
Distinguished Speaker in Software Engineering, "Compositional Approach for Modeling and Verification of Software Systems," Southern Methodist University, March 2001.
Keynote Speaker, "Compositional Modeling and Verification of Software systems," Object-Oriented Software Technology and Applications Workshop, Oct. 2001.
Keynote Speaker, "Model and Heuristic Technique for Efficient Verification of Component-Based Software Systems," The 1^st IEEE Int’l Conference on Cognitive Informatics, Calgary, Alberta, Canada, August 19-20, 2002.
Distinguished Speaker, "Transdisciplinary Research and Education in Healthcare, Management, and Information Technology," National Chung Cheng University, Oct. 2002.
Keynote Speaker, "New Areas of Applied Artificial Intelligent Research," The 14^th IEEE Int’l Conference on Tools with Artificial Intelligence, Washington D.C., Nov. 2002.
Keynote Speaker, "Transdisciplinary Research and Education in Healthcare, Management, and Information Technology," Conference on Sun Yat-sen Philosophy and Modern Society: Managerial Science’s Practice and Application, Dec. 2002.
Keynote Speaker, "Applications of A.I. Research in Bioinformatics," World Congress on Integrated Design and Process Science, Austin, Texas, Dec. 2003.
Keynote Speaker, "Attacks and Countermeasures in Software System Security," IEEE Int’l Symposium on E-Commerce for Dynamic E-Business, Beijing, Sept. 2004.
Keynote Speaker, "Intrusion Detection for Sensor Networks," The 19^th IEEE Advanced Information Networking and Application Conference, Taipei, March 29-30, 2005.
Distinguished Speaker, "Transdisciplinary Research and Education in Health Science, Management, and Information Technology," the 9^th Conference on Integrated Design and Process Technology, San Diego, CA, June 25-28, 2006.
Distinguished Speaker, "Challenges and Opportunities of Ubiquitous Computing Paradigm," Forum on Future Computing – Transparent Computing and Active Services, Tsinghua University, Beijing, June 23-25, 2007.
Keynote Speaker, "Opportunities and Challenges of Sensor Networks Computing," National Computer Symposium, Taiwan, Dec. 20-21, 2007.
Keynote Speaker, "A New Frontier: Software Engineering for Cyber Physical Systems," the 11^th SDPS Transdisciplinary Conference on Integrated Design and Process Science, June 1-6, Taichung, Taiwan, 2008.
Keynote Speaker, "A New Frontier: Cyber Physical Systems," the 2009 Joint Conference on Pervasive Computing, December 3-5, 2009, Taipei, Taiwan, 2009.
Distinguished Speaker, "Green Computing," Annual Conference on Transdisciplinary & Transnational Transcultural, May 23-27, Georgetown, Texas, May 23-27, 2010.

■ Invited Talks

"A Requirement Theory of New Software Engineering Paradigms," Switching System Group, Fujitsu Laboratory, Kawasaki, Japan, Oct. 1987.
"A Frame-and-Rule Oriented Requirements Specification Language for New Software Engineering Paradigm," University of Florida, Gainesville, July 1989.
"A Frame-and-Rule Oriented Requirements Specification Language for New Software Engineering Paradigm," Institute of Information Industry, Taiwan, July 1989.
"Reverse Engineering," Institute of Information Industry, Taiwan, July 1989.
"Real-Time Software Testing and Debugging," one-week seminar at National Chiao-Tung University, Taiwan, August 1989.
"A Frame-and-Rule Based System for Software Development Using an Integrated Software Engineering Paradigm," George Mason University, Faifax, VA, Jan. 1990.
"FRORL: A Requirement Language for New Software Engineering Paradigms," Switching System Group, Fujitsu Laboratory, Kawasaki, Japan, March 1990.
"On Real-Time Distributed Monitoring," Tung-Hai University, May 1990.
"Artificial Intelligence and Software Engineering," Academia Sinica, Taiwan, Aug. 1990.
Tutorial on "Artificial Intelligence for Software Engineering," 1990 IEEE International Conference on Tools for A.I., Fairfax, VA, Nov. 1990.
Tutorial on "Artificial Intelligence Technique for Software Engineering," 1991 International Conference on Software Engineering and Knowledge Engineering, Skokie, IL, June 1991.
"A Distributed Cooperative Agents Architecture for Software Development," IJCAI Workshop on Intelligent and Cooperative Information Systems, University of Technology, Sydney, Australia, Aug. 1991.
"A.I./K.E. Techniques for Software Engineering," Fujitsu International Software Symposium, Fujitsu Limited, Kawasaki, Japan, Sept. 1991.
"Artificial Intelligence for Software Engineering," National Taiwan University, Taipei, Taiwan, Sept. 1991.
"On Distributed Real-Time Systems Monitoring, Visualization, and Debugging," Chung-Shan Institute of Science and Technology, Long-Tang, June 1992.
"Visualization and Debugging of Distributed Real-Time Systems," 1992 International Conference on Automation, Robotics, and Computer Vision, Singapore, Sept. 1992.
"Visualization and Debugging of Distributed Real-Time Systems," Hitachi, Japan, March 1993.
"Knowledge-Based Approach to the Specification, Analysis, and Transformation of Real-Time Distributed Systems," Fujitsu Lab, Kawasaki, Japan, April 1993.
"A Requirements Language for Autonomous Decentralized Systems," Hitachi System Plaza, Japan, April 1993.
"Knowledge-Based Software Engineering," USAF Rome Laboratory, Jan. 1994.
"Knowledge-Based Software Design for Real-Time Distributed Systems," University of Toronto, Toronto, Ontario, Jan. 1994.
"Knowledge-Based Approach for the Specification, Analysis, and Transformation of Real-Time Distributed Systems," University of California at Berkeley, CA, Feb. 1994.
"Knowledge-Based Software Requirements Specification Language," State University of New York at Buffalo, Buffalo, New York, May 1994.
"Knowledge-Based Software Engineering for Real-Time Distributed Systems," University of Texas at Austin, June 1994.
Tutorial on "Knowledge-Based Software Development for Real-Time Distributed Systems,"International Computer Symposium, National Chiao-Tung University, Hsinchu, Taiwan, Dec. 1994.
"Software Technology in National Information Infrastructure," National Development Symposium, Taipei, Taiwan, June 1995.
"A Specification-Based Software Architecture," Naval Postgraduate School, Monterey, CA, Sept. 1995.
"Research Issues in Software Architecture Design," University of Houston, Houston, Texas, Oct. 1995.
Tutorial on "A Knowledge-based Approach to Software Architecture," the 7^th IEEE Tools with Artificial Intelligence Conference, Washington, D.C., Nov. 1995.
"Knowledge-Based Software Architecture," National Central University, May 1997.
"Formal Verification of Software Architecture," University of Southern California, Feb. 1997.
"Compositional Verification," NSF Workshop on Foundation of Software Systems, Tulane University, Dec. 1997.
"E-Commerce," IEEE Knowledge and Data Engineering Exchange Workshop, Nov. 1998.
"Compositional Verification of Software Architecture," NSF/ARO Workshop on Evolutionary Software Construction, Italy, 2000.
"Compositional Approach for Modeling and Verification of Software Systems," University of Toronto, Canada, Dec. 2000.
"Specification and Verification of Software Agents," Academia Sinica, Taipei, Oct. 2000.
"Transdisciplinary Research and Education in Healthcare, Management, and Information Technology," China Medical University Hospital, Dec. 2002.
"A Framework for Adaptive Intrusion Detection Systems," NSF/Industry Software Engineering Research Center, Ball State Univeristy, Muncie, IN, Nov. 16-17, 2005.
"Fuzzy Model Tuning for Intrusion Detection Systems," The 3^rd IFIP International Autonomic and Trusted Computing Conference, Wuhan, China, Sept. 2006.
"Personal Sense of Persistent Fundamental Research Enquiry," Stanford University, Kozmetsky Global Collaboratory: Tenth Anniversary Celebration, Workshop on KGC Community’s Shared Research Aspirations, Palo Alto, CA, May 12-18, 2007.
"Global Network for Transdisciplinary Collaboration," 11^th SDPS Transdisciplinary Conference on Integrated Design and Process Science, June 1-6, Taichung, Taiwan, 2008.
"A Framework of Machine Learning based Intrusion Detection for Wireless Sensor Networks," The 2^nd IEEE International Conference on Sensor Network, Ubiquitous, and Trustworthy Computing (SUTC2008), Taichung, Taiwan, June 11-13, 2008.
"Interdisciplinary Research at Asia University," Kyoto University, Japan April 2, 2018.

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